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This function receives a dataframe with the optical density measurements, and, optionally and metadata data frame.

Usage

DGrowthRFromData(od_data, metadata = NULL, verbose = TRUE)

Arguments

od_data

A data.frame containing all of the optical density data. It should have a "Time" column with each row being a timepoint and the rest of the columns being an individual growth curve. The names of the growth curves should match those in the "curve_id" field in metadata.

metadata

Optional. A data.frame containing a "curve_id" field and all additional metadata. If none is provided, then one is created automatically containing only the wells from the curve_ids in od_data.

verbose

A logical variable indicating if DGrowthR object should be verbose.

Value

A DGrowthR object with filled raw_od, od_data, and metadata slots.